Mount Lidgebird pinwheel snail, Reference Genome, PacBio-HiFi
Dataset size is: 0.00 Bit
This dataset is currently under a short embargo period until August 14, 2026 to enable primary access by research partners.
If you would like access during this period please contact us here or contact the project lead directly (see details in the table below) for collaboration opportunities.
Data and Resources
Please see the initiative
Data Policy
for attribution information.
Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Resource Permissions | organization_member_after_embargo:date_of_transfer_to_archive:365:tsi-consortium-members |
| Access Control Date | 2026-08-14 |
| Access Control Mode | date |
| Sequence Data Type | pacbio-hifi |
| analysis_software | SMRT Link Analysis |
| analysis_software_version | 13.3.0.253824 |
| bait_set_name | NA |
| bait_set_reference | NA |
| base_url | https://downloads-qcif.bioplatforms.com/bpa/tsi_staging/pacbio-hifi/BPAOPS-1862/20250812_TSI_AGRF_CAGRF25040272_m84073_250729_081825_s4/ |
| bioplatforms_project | Threatened Species Initiative |
| cell_postion | D01 |
| class | Gastropoda |
| common_name | Mount Lidgebird pinwheel snail |
| data_context | Reference Genome |
| data_custodian | Isabel Hyman, Nelia Perry |
| data_type | PacBio-HiFi |
| dataset_id | 102.100.100/629186 |
| date_of_transfer | 2025-08-14 |
| date_of_transfer_to_archive | 2025-08-15 |
| dna_treatment | SHEARING followed by PCR |
| experimental_design | NA |
| facility_project_code | CAGRF25040272 |
| facility_sample_id | 678588.0 |
| family | Charopidae |
| fast5_compression | NA |
| file_type | BAM |
| flowcell_id | m84073_250729_081825_s4 |
| flowcell_type | SMRT Cell 25M |
| folder_name | 20250812_TSI_AGRF_CAGRF25040272_m84073_250729_081825_s4 |
| genus | pseudocharopa |
| insert_size_range | 9000.0 |
| library_comments | NA |
| library_construction_protocol | Ampli-Fi Amplifying genomic DNA for SMRTbell library preparation and HiFi sequencing |
| library_id | 102.100.100/678588 |
| library_index_id | NA |
| library_index_id_dual | NA |
| library_index_seq_dual | NA |
| library_index_sequence | NA |
| library_layout | NA |
| library_location | AGRF |
| library_ng_ul | 160pM |
| library_oligo_sequence | NA |
| library_oligo_sequence_dual | NA |
| library_pcr_cycles | 8.0 |
| library_pcr_reps | NA |
| library_prep_date | 2025-07-02 |
| library_prepared_by | Trent Peters |
| library_selection | size fractionation |
| library_source | GENOMIC |
| library_strategy | WGA |
| library_type | PacBio-HiFi |
| metadata_revision_date | 2025-08-26 |
| metadata_revision_filename | 20250826_Sample_metadata_COMBINED-FOR-PORTAL_NOLATLON.xlsx |
| model_base_caller | NA |
| movie_length | 30Hrs |
| n_libraries_pooled | 1.0 |
| order | Stylommatophora |
| phylum | Mollusca |
| sample_id | 102.100.100/666669 |
| scientific_name | Pseudocharopa ledgbirdi |
| sequencing_facility | AGRF |
| sequencing_kit_chemistry_version | Revio SPRQ sequencing plate |
| sequencing_model | PacBio Revio |
| sequencing_platform | PACBIO_SMRT |
| species | ledgbirdi |
| specimen_id | AM C584411 |
| taxon_id | 9751589.0 |
| taxonomic_group | mollusc |
| ticket | BPAOPS-1862 |
| tissue_number | L1477 |
| work_order | NA |