Condamine earless dragon, Reference Genome, PacBio-HiFi, tail clip
Dataset size is: 0.00 Bit
This dataset is currently under a short embargo period until August 14, 2026 to enable primary access by research partners.
If you would like access during this period please contact us here or contact the project lead directly (see details in the table below) for collaboration opportunities.
Data and Resources
Please see the initiative
Data Policy
for attribution information.
Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Geospatial Coverage |
Dataset extentMap tiles & Data by OpenStreetMap, under CC BY SA.
|
| Resource Permissions | organization_member_after_embargo:date_of_transfer_to_archive:365:tsi-consortium-members |
| Access Control Date | 2026-08-14 |
| Access Control Mode | date |
| Sequence Data Type | pacbio-hifi |
| access_rights | Location information restricted |
| ala_specimen_url | NA |
| analysis_software | SMRT Link Analysis |
| analysis_software_version | 13.3.0.253824 |
| ancillary_notes | live |
| associated_media | specimen identication image - chin pattern |
| bait_set_name | NA |
| bait_set_reference | NA |
| base_url | https://downloads-qcif.bioplatforms.com/bpa/tsi_staging/pacbio-hifi/BPAOPS-1859/20250812_TSI_AGRF_CAGRF24070336_m84073_250725_063015_s1/ |
| bioplatforms_project | Threatened Species Initiative |
| cell_postion | A01 |
| certainty | uncertain |
| class | Reptilia |
| collection_date | 2024-09-25 |
| collection_method | Hand |
| collector | Stephen Peck |
| common_name | Condamine earless dragon |
| country | Australia |
| data_context | Reference Genome |
| data_custodian | JP emery |
| data_type | PacBio-HiFi |
| dataset_id | 102.100.100/358889 |
| date_of_transfer | 2025-08-14 |
| date_of_transfer_to_archive | 2025-08-15 |
| decimal_latitude_public | -27.5 |
| decimal_longitude_public | 151.4 |
| dna_treatment | SHEARING |
| experimental_design | NA |
| facility_project_code | CAGRF24070336 |
| facility_sample_id | 629021.0 |
| family | Agamidae |
| fast5_compression | NA |
| file_type | BAM |
| flowcell_id | m84073_250725_063015_s1 |
| flowcell_type | SMRT Cell 25M |
| folder_name | 20250812_TSI_AGRF_CAGRF24070336_m84073_250725_063015_s1 |
| genotypic_sex | not determined |
| genus | Tympanocryptis |
| habitat | Grassy roadside verge in cropping |
| health_state | healthy |
| insert_size_range | 13000.0 |
| institution_name | University of Southern Queensland |
| latitude | -27.5 |
| library_comments | NA |
| library_construction_protocol | Preparing whole genome and metagenome libraries using SMRTbell® prep kit 3.0 |
| library_id | 102.100.100/629021 |
| library_index_id | NA |
| library_index_id_dual | NA |
| library_index_seq_dual | NA |
| library_index_sequence | NA |
| library_layout | NA |
| library_location | AGRF |
| library_ng_ul | 300pM |
| library_oligo_sequence | NA |
| library_oligo_sequence_dual | NA |
| library_pcr_cycles | NA |
| library_pcr_reps | NA |
| library_prep_date | 2025-06-02 |
| library_prepared_by | Trent Peters |
| library_selection | size fractionation |
| library_source | GENOMIC |
| library_strategy | WGS |
| library_type | PacBio-HiFi |
| lifestage | Adult |
| location_text | Sample collected on Ziesemer Kummerows Rd |
| longitude | 151.4 |
| metadata_revision_date | 2025-08-26 |
| metadata_revision_filename | 20250826_Sample_metadata_COMBINED-FOR-PORTAL_NOLATLON.xlsx |
| method_of_determination | NA |
| model_base_caller | NA |
| movie_length | 30Hrs |
| n_libraries_pooled | 2.0 |
| order | Squamata |
| phenotypic_sex | not determined |
| phylum | Chordata |
| prior_genetics | NA |
| sample_custodian | JP emery |
| sample_id | 102.100.100/628732 |
| sample_quality | Freshly collected |
| sample_type | tissue sample |
| scientific_name | Tympanocyptis condaminensis |
| sequencing_facility | AGRF |
| sequencing_kit_chemistry_version | Revio SPRQ sequencing plate |
| sequencing_model | PacBio Revio |
| sequencing_platform | PACBIO_SMRT |
| source_population | Bongeen |
| species | condaminensis |
| specimen_id_description | JP Emery research |
| state_or_region | Queensland |
| subspecies | NA |
| taxonomic_group | Reptile |
| ticket | BPAOPS-1859 |
| tissue_collection_type | Collected from a live specimen during field survey |
| tissue_number | Z81522 |
| tissue_preservation | Victoria Museum protocol |
| tissue_preservation_temperature | 2.0 |
| tissue_type | tail clip |
| type_status | NA |
| wild_captive | wild |
| work_order | NA |