Hairy nosed wombat, Reference Genome, PacBio-HiFi, blood
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Data and Resources
This data is made available openly under a Creative Commons Attribution license.
Please see the initiative
Data Policy
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Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Resource Permissions | organization_member_after_embargo:date_of_transfer_to_archive:365:tsi-consortium-members |
| Access Control Date | 2025-10-22 |
| Access Control Mode | date |
| Sequence Data Type | pacbio-hifi |
| analysis_software | SMRT Link Analysis |
| analysis_software_version | 13.0.0.207600 |
| bait_set_name | NA |
| bait_set_reference | NA |
| base_url | https://downloads-qcif.bioplatforms.com/bpa/tsi_staging/pacbio-hifi/BPAOPS-1707/20240919_TSI_AGRF_CAGRF24060208_m84073_240914_160016_s2/ |
| bioplatforms_project | Threatened Species Initiative |
| cell_postion | A01 |
| common_name | Hairy nosed wombat |
| data_context | Reference Genome |
| data_custodian | Jeremy Austin |
| data_type | PacBio-HiFi |
| dataset_id | 102.100.100/358890 |
| date_of_transfer | 2024-10-22 |
| date_of_transfer_to_archive | 2024-10-22 |
| dna_treatment | SHEARING |
| experimental_design | NA |
| facility_project_code | CAGRF24060208 |
| facility_sample_id | 625997.0 |
| fast5_compression | NA |
| file_type | BAM |
| flowcell_id | m84073_240914_160016_s2 |
| flowcell_type | SMRT Cell 25M |
| folder_name | 20240919_TSI_AGRF_CAGRF24060208_m84073_240914_160016_s2 |
| genus | Lashiorhinus |
| insert_size_range | 15500.0 |
| library_comments | NA |
| library_construction_protocol | Preparing HiFi SMRTbell Libraries using SMRTbell Express Template Prep Kit 2.0 |
| library_id | 102.100.100/625997 |
| library_index_id | NA |
| library_index_id_dual | NA |
| library_index_seq_dual | NA |
| library_index_sequence | NA |
| library_layout | NA |
| library_location | AGRF |
| library_ng_ul | 300pM |
| library_oligo_sequence | NA |
| library_oligo_sequence_dual | NA |
| library_pcr_cycles | NA |
| library_pcr_reps | NA |
| library_prep_date | 2024-08-18 |
| library_prepared_by | Trent Peters |
| library_selection | size fractionation |
| library_source | GENOMIC |
| library_strategy | WGS |
| library_type | PacBio-HiFi |
| metadata_revision_date | 2025-08-26 |
| metadata_revision_filename | 20250826_Sample_metadata_COMBINED-FOR-PORTAL_NOLATLON.xlsx |
| model_base_caller | NA |
| movie_length | 30Hrs |
| n_libraries_pooled | 1.0 |
| sample_id | 102.100.100/625018 |
| scientific_name | Lashiorhinus krefftii |
| sequencing_facility | AGRF |
| sequencing_kit_chemistry_version | Revio sequencing plate |
| sequencing_model | PacBio Revio |
| sequencing_platform | PACBIO_SMRT |
| species | krefftii |
| specimen_id | M143 |
| taxonomic_group | marsupial |
| ticket | BPAOPS-1707 |
| tissue_number | M143-Blood |
| tissue_type | blood |
| work_order | LONGSCAGRF24060208-1 |