Dibbler, Population genomics, Illumina FASTQ, ear notch
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This dataset is currently under a short embargo period until February 12, 2026 to enable primary access by research partners.
If you would like access during this period please contact us here or contact the project lead directly (see details in the table below) for collaboration opportunities.
Data and Resources
This dataset has no data
Please see the initiative
Data Policy
for attribution information.
Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Resource Permissions | organization_member_after_embargo:date_of_transfer_to_archive:365:tsi-consortium-members |
| Access Control Date | 2026-02-12 |
| Access Control Mode | date |
| Sequence Data Type | illumina-shortread |
| access_rights | Location information restricted |
| analysis_software | NovaSeq X Control Software v1.2.2.48004; Real Time Analysis v4.6.7; Dragen BCL Convert v07.021.645.4.0.3 |
| base_url | https://downloads-qcif.bioplatforms.com/bpa/tsi_staging/illumina-fastq/BPAOPS-1749/20250212_TSI_AGRF_CAGRF25010103_22L22TLT4/ |
| bioplatforms_project | Threatened Species Initiative |
| ccg_jira_ticket | BPAOPS-1749 |
| certainty | Certain |
| class | Mammalia |
| collection_date | 2023-10-25 |
| collection_method | Elliot trap |
| collector | Saul Cowen | DBCA |
| common_name | Dibbler |
| country | Australia |
| data_context | Population genomics |
| data_custodian | Kym Ottewell | DBCA |
| data_type | Illumina FASTQ |
| dataset_id | 102.100.100/358896 |
| date_of_transfer | 2025-02-12 |
| date_of_transfer_to_archive | 2025-02-14 |
| facility_code | CAGRF25010103 |
| facility_project_code | CAGRF25010103 |
| facility_sample_id | 18511-15 |
| family | Dasyuridae |
| flowcell_id | 22L22TLT4 |
| flowcell_type | 10B-300 |
| folder_name | 20250212_TSI_AGRF_CAGRF25010103_22L22TLT4 |
| genus | Parantechinus |
| insert_size_range | 479.0 |
| institution_name | Department of Biodiversity, Conservation and Attractions |
| library_construction_protocol | Illumina DNA PCR-free |
| library_id | 102.100.100/626296 |
| library_index_seq_dual | UDP0047-F & UDP0047-R |
| library_location | AGRF Melbourne |
| library_ng_ul | 1.11 |
| library_oligo_sequence_dual | GTCCTGGATA-CGGTGGCGAA |
| library_prep_date | 2025-01-30 |
| library_prepared_by | LJ |
| library_source | DNA |
| library_strategy | WGS |
| lifestage | Adult |
| location_text | Whitlock Island |
| material_conc_ng_ul | 428.0 |
| material_extracted_by | Melissa Millar | DBCA |
| material_extraction_date | 2024-05-30 |
| material_extraction_method | Gentra Puregene Mouse Tail Kit |
| material_extraction_type | DNA |
| metadata_revision_date | 2025-08-26 |
| metadata_revision_filename | 20250826_Sample_metadata_COMBINED-FOR-PORTAL_NOLATLON.xlsx |
| method_of_determination | Direct observation |
| order | Dasyuromorphia |
| phenotypic_sex | male |
| phylum | Chordata |
| sample_custodian | Kym Ottewell | DBCA |
| sample_id | 102.100.100/625308 |
| sample_quality | Good |
| sample_type | Tissue |
| scientific_name | Parantechinus apicalis |
| sequencing_facility | AGRF |
| sequencing_kit_chemistry_version | XLEAP SBS |
| sequencing_model | X Plus |
| sequencing_platform | NovaSeq |
| source_population | Whitlock Island |
| species | apicalis |
| specimen_id | T16320 |
| specimen_id_description | DBCA internal identifier |
| state_or_region | Western Australia |
| taxon_id | 9291.0 |
| taxonomic_group | Mammal |
| ticket | BPAOPS-1749 |
| tissue_collection_type | WA Government |
| tissue_number | T16320 |
| tissue_preservation | 100% ethanol |
| tissue_preservation_temperature | Stable room temp |
| tissue_type | ear notch |
| wild_captive | Wild-caught |
| work_order | 14080 |