Dibbler, Population genomics, Illumina FASTQ, ear notch
Dataset size is: 0.00 Bit
Data and Resources
This dataset has no data
This data is made available openly under a Creative Commons Attribution license.
Please see the initiative
Data Policy
for attribution information.
Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Resource Permissions | organization_member_after_embargo:date_of_transfer_to_archive:365:tsi-consortium-members |
| Access Control Date | 2026-02-12 |
| Access Control Mode | date |
| Sequence Data Type | illumina-shortread |
| access_rights | Location information restricted |
| analysis_software | NovaSeq X Control Software v1.2.2.48004; Real Time Analysis v4.6.7; Dragen BCL Convert v07.021.645.4.0.3 |
| base_url | https://downloads-qcif.bioplatforms.com/bpa/tsi_staging/illumina-fastq/BPAOPS-1749/20250212_TSI_AGRF_CAGRF25010103_22L22TLT4/ |
| bioplatforms_project | Threatened Species Initiative |
| ccg_jira_ticket | BPAOPS-1749 |
| certainty | Certain |
| class | Mammalia |
| collection_date | 2016-11-23 |
| collection_method | Elliot trap |
| collector | Sarah Comer | DBCA |
| collector_sample_id | 769B6A3 |
| common_name | Dibbler |
| country | Australia |
| data_context | Population genomics |
| data_custodian | Kym Ottewell | DBCA |
| data_type | Illumina FASTQ |
| dataset_id | 102.100.100/358896 |
| date_of_transfer | 2025-02-12 |
| date_of_transfer_to_archive | 2025-02-14 |
| facility_code | CAGRF25010103 |
| facility_project_code | CAGRF25010103 |
| facility_sample_id | 18511-3 |
| family | Dasyuridae |
| flowcell_id | 22L22TLT4 |
| flowcell_type | 10B-300 |
| folder_name | 20250212_TSI_AGRF_CAGRF25010103_22L22TLT4 |
| genus | Parantechinus |
| insert_size_range | 475.0 |
| institution_name | Department of Biodiversity, Conservation and Attractions |
| library_construction_protocol | Illumina DNA PCR-free |
| library_id | 102.100.100/626284 |
| library_index_seq_dual | UDP0035-F & UDP0035-R |
| library_location | AGRF Melbourne |
| library_ng_ul | 1.18 |
| library_oligo_sequence_dual | GGTAACTCGC-AAGTTGGTGA |
| library_prep_date | 2025-01-30 |
| library_prepared_by | LJ |
| library_source | DNA |
| library_strategy | WGS |
| lifestage | Adult |
| location_text | Fitzgerald River National Park |
| material_conc_ng_ul | 23.3 |
| material_extracted_by | Shelley McArthur | DBCA |
| material_extraction_date | 2018-01-01 |
| material_extraction_method | TNES salt extraction |
| material_extraction_type | DNA |
| metadata_revision_date | 2025-08-26 |
| metadata_revision_filename | 20250826_Sample_metadata_COMBINED-FOR-PORTAL_NOLATLON.xlsx |
| method_of_determination | Direct observation |
| order | Dasyuromorphia |
| phenotypic_sex | male |
| phylum | Chordata |
| sample_custodian | Kym Ottewell | DBCA |
| sample_id | 102.100.100/625296 |
| sample_quality | Good |
| sample_type | Tissue |
| scientific_name | Parantechinus apicalis |
| sequencing_facility | AGRF |
| sequencing_kit_chemistry_version | XLEAP SBS |
| sequencing_model | X Plus |
| sequencing_platform | NovaSeq |
| source_population | Fitzgerald River National Park |
| species | apicalis |
| specimen_id | T07573 |
| specimen_id_description | DBCA internal identifier |
| state_or_region | Western Australia |
| taxon_id | 9291.0 |
| taxonomic_group | Mammal |
| ticket | BPAOPS-1749 |
| tissue_collection_type | WA Government |
| tissue_number | T07573 |
| tissue_preservation | 100% ethanol |
| tissue_preservation_temperature | Stable room temp |
| tissue_type | ear notch |
| wild_captive | Wild-caught |
| work_order | 14080 |