Bilby, Transcriptome, Illumina FASTQ, spleen
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Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Resource Permissions | organization_member_after_embargo:date_of_transfer_to_archive:365:tsi-consortium-members |
| Access Control Date | 2023-06-30 |
| Access Control Mode | date |
| Sequence Data Type | illumina-shortread |
| analysis_software | bcl2fastq2 |
| analysis_software_version | v2.20 |
| base_url | https://downloads-qcif.bioplatforms.com/bpa/tsi_staging/illumina-fastq/BPAOPS-1294/20220629_TSI_UNSW_HHV7HDRX2/ |
| ccg_jira_ticket | BPAOPS-1294 |
| cell_postion | N/A |
| class | Mammalia |
| common_name | Bilby |
| country | Australia |
| data_context | Transcriptome |
| data_custodian | Carolyn Hogg |
| data_type | Illumina FASTQ |
| dataset_id | 102.100.100/358782 |
| date_of_transfer | 2022-06-30 |
| date_of_transfer_to_archive | 2022-06-30 |
| description | transcriptomes (multiple species) |
| dna_treatment | N/A |
| experimental_design | N/A |
| facility_project_code | 682001389.0 |
| facility_sample_id | PEE10777A12 |
| family | Thylacomyidae |
| file_type | fastq.gz |
| flowcell_id | HHV7HDRX2 |
| flowcell_type | NovaSeq S1 |
| folder_name | 20220629_TSI_UNSW_HHV7HDRX2 |
| genus | Macrotis |
| insert_size_range | 100bp PE |
| library_comments | N/A |
| library_construction_protocol | Illumina mRNA prep ligation |
| library_id | 102.100.100/408040 |
| library_index_id | UDP0092 |
| library_index_seq | GCGTTGGTAT-GGAAGTATGT |
| library_layout | Paired end |
| library_location | Ramaciotti Centre for Genomics |
| library_ng_ul | 2.38 |
| library_pcr_cycles | 10.0 |
| library_pcr_reps | 1.0 |
| library_prep_date | 2022-06-21 |
| library_prepared_by | Ramaciotti Centre for Genomics |
| library_selection | PolyA |
| library_source | TRANSCRIPTOMIC |
| library_strategy | RNA-Seq |
| library_type | Illumina-transcriptomics |
| location_text | Mosman |
| metadata_revision_date | 2025-08-26 |
| metadata_revision_filename | 20250826_Sample_metadata_COMBINED-FOR-PORTAL_NOLATLON.xlsx |
| movie_length | N/A |
| n_libraries_pooled | 12.0 |
| order | Peramelemorphia |
| phylum | Chordata |
| sample_id | 102.100.100/405658 |
| sample_type | Tissue sample |
| scientific_name | Macrotis lagotis |
| sequencing_facility | UNSW |
| sequencing_kit_chemistry_version | NovaSeq v1.5 |
| sequencing_model | Illumina NovaSeq 6000 |
| sequencing_platform | ILLUMINA |
| source_population | Taronga Zoo |
| species | lagotis |
| specimen_id | Bilby-M-Taronga |
| state_or_region | New South Wales |
| taxon_id | 92651.0 |
| taxonomic_group | marsupial |
| ticket | BPAOPS-1294 |
| tissue_number | M-spleen |
| tissue_type | spleen |
| wild_captive | captive |
| work_order | 14031 |