Plant Pathogen, Genomics, Illumina Shortread, Sample ID 395726
Dataset size is: 0.00 Bit
This dataset is currently under a short embargo period until July 30, 2026 to enable primary access by research partners.
If you would like access during this period please contact us here or contact the project lead directly (see details in the table below) for collaboration opportunities.
Data and Resources
Please see the initiative
Data Policy
for attribution information.
Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Resource Permissions | organization_member_after_embargo:date_of_transfer_to_archive:365:pp-prj022 |
| Access Control Date | 2026-07-30 |
| Access Control Mode | date |
| Sequence Data Type | illumina-shortread |
| analysis_software | NovaSeq X Control Software v1.3.1.59007; Real Time Analysis v4.29.3; Dragen BCL Convert vt 07.031.732.4.3.6 |
| base_url | https://downloads-qcif.bioplatforms.com/bpa/pp_staging/illumina-shortread/BPAOPS-1848/20250730_PP_AGRF_CAGRF25030271_233TLMLT3/ |
| bioplatforms_dataset_id | 102.100.100/399047 |
| bioplatforms_library_id | 102.100.100/397985 |
| bioplatforms_project | Plant Pathogen Initiative |
| bioplatforms_project_code | PP022_Bgt |
| bioplatforms_sample_id | 102.100.100/395726 |
| ccg_jira_ticket | BPAOPS-1848 |
| class | Leotiomycetes |
| collection_date | 1905-07-15 |
| collection_method | Benzi tube |
| collection_permit | #5956 (import permit) |
| collector_sample_id | 23PM046 |
| common_name | wheat powdery mildew |
| country | Australia |
| data_context | Genomics |
| data_type | Short read |
| date_of_transfer | 2025-07-30 |
| date_of_transfer_to_archive | 2025-07-30 |
| description | Illumina Short read |
| facility | AGRF |
| facility_project_code | CAGRF25030271 |
| facility_sample_id | 19228-9 |
| family | Erysiphaceae |
| flowcell_id | 233TLMLT3 |
| flowcell_type | 10B-300 |
| folder_name | 20250730_PP_AGRF_CAGRF25030271_233TLMLT3 |
| genus | Blumeria |
| host_common_name | Wheat |
| host_family | Poaceae |
| host_scientific_name | Triticum aestivum |
| insert_size_range | 537.0 |
| library_construction_protocol | Illumina DNA PCR-Free |
| library_id | 397985 |
| library_index_seq_dual | UDP0059-F & UDP0059-R |
| library_location | AGRF Melbourne |
| library_ng_ul | 1.84 |
| library_oligo_sequence_dual | CTGTTGGTCC-ATAGACCGTT |
| library_prep_date | 2025-07-16 |
| library_prepared_by | JL |
| library_source | DNA |
| material_conc_ng_ul | 0.7 |
| material_extracted_by | Steven Chang | Centre for Crop and Disease Management (CCDM), Curtin University |
| material_extraction_date | 2025-02-20 |
| material_extraction_method | CTAB |
| material_extraction_type | gDNA |
| metadata_revision_date | 2025-06-20 |
| metadata_revision_filename | 2025-04-08_Combined_Plant_Pathogen_sample_metadata_forQCIF_removelatlong.xlsx |
| order | Erysiphales |
| phylum | Ascomycota |
| project_lead | James Hane | Centre for Crop and Disease Management (CCDM), Curtin University |
| sample_collection_type | Whole genome |
| sample_custodian | Steven Chang | Centre for Crop and Disease Management (CCDM), Curtin University |
| scientific_name | Blumeria graminis f.sp tritici |
| scientific_name_authorship | Samuel Blumer |
| scientific_name_note | forma specialis |
| sequencing_facility | AGRF |
| sequencing_kit_chemistry_version | XLEAP SBS |
| sequencing_model | X Plus |
| sequencing_platform | NovaSeq |
| species | graminis |
| specimen_custodian | Centre for Crop and Disease Management (CCDM), Curtin University |
| specimen_id | CCDM_23PM046 |
| specimen_id_description | Centre for Crop and Disease Management (CCDM), Curtin University |
| state_or_region | SA |
| sub_species | tritici |
| taxon_id | 62690 |
| taxonomic_group | Fungi |
| ticket | BPAOPS-1848 |