Plant Pathogen, Genomics, Illumina Shortread, Sample ID 395723
Dataset size is: 0.00 b
Data and Resources
This data is made available openly under a Creative Commons Attribution license.
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Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Resource Permissions | organization_member_after_embargo:date_of_transfer_to_archive:365:pp-prj022 |
| Access Control Date | 2026-07-30 |
| Access Control Mode | date |
| Sequence Data Type | illumina-shortread |
| analysis_software | NovaSeq X Control Software v1.3.1.59007; Real Time Analysis v4.29.3; Dragen BCL Convert vt 07.031.732.4.3.6 |
| base_url | https://downloads-qcif.bioplatforms.com/bpa/pp_staging/illumina-shortread/BPAOPS-1848/20250730_PP_AGRF_CAGRF25030271_233TLMLT3/ |
| bioplatforms_dataset_id | 102.100.100/399047 |
| bioplatforms_library_id | 102.100.100/397982 |
| bioplatforms_project | Plant Pathogen Initiative |
| bioplatforms_project_code | PP022_Bgt |
| bioplatforms_sample_id | 102.100.100/395723 |
| ccg_jira_ticket | BPAOPS-1848 |
| class | Leotiomycetes |
| collection_date | 1905-07-14 |
| collection_method | Benzi tube |
| collection_permit | NA |
| collector_sample_id | 22PM422 |
| common_name | wheat powdery mildew |
| country | Australia |
| data_context | Genomics |
| data_type | Short read |
| date_of_transfer | 2025-07-30 |
| date_of_transfer_to_archive | 2025-07-30 |
| description | Illumina Short read |
| facility | AGRF |
| facility_project_code | CAGRF25030271 |
| facility_sample_id | 19228-6 |
| family | Erysiphaceae |
| flowcell_id | 233TLMLT3 |
| flowcell_type | 10B-300 |
| folder_name | 20250730_PP_AGRF_CAGRF25030271_233TLMLT3 |
| genus | Blumeria |
| host_common_name | Wheat |
| host_family | Poaceae |
| host_scientific_name | Triticum aestivum |
| insert_size_range | 490.0 |
| library_construction_protocol | Illumina DNA PCR-Free |
| library_id | 397982 |
| library_index_seq_dual | UDP0069V3-F & UDP0069V3-R |
| library_location | AGRF Melbourne |
| library_ng_ul | 1.44 |
| library_oligo_sequence_dual | CCAAGGCCTT-TCGAAGTACT |
| library_prep_date | 2025-07-19 |
| library_prepared_by | JL |
| library_source | DNA |
| material_conc_ng_ul | 0.8 |
| material_extracted_by | Steven Chang | Centre for Crop and Disease Management (CCDM), Curtin University |
| material_extraction_date | 2025-02-20 |
| material_extraction_method | CTAB |
| material_extraction_type | gDNA |
| metadata_revision_date | 2025-06-20 |
| metadata_revision_filename | 2025-04-08_Combined_Plant_Pathogen_sample_metadata_forQCIF_removelatlong.xlsx |
| order | Erysiphales |
| phylum | Ascomycota |
| project_lead | James Hane | Centre for Crop and Disease Management (CCDM), Curtin University |
| sample_collection_type | Whole genome |
| sample_custodian | Steven Chang | Centre for Crop and Disease Management (CCDM), Curtin University |
| scientific_name | Blumeria graminis f.sp tritici |
| scientific_name_authorship | Samuel Blumer |
| scientific_name_note | forma specialis |
| sequencing_facility | AGRF |
| sequencing_kit_chemistry_version | XLEAP SBS |
| sequencing_model | X Plus |
| sequencing_platform | NovaSeq |
| species | graminis |
| specimen_custodian | Centre for Crop and Disease Management (CCDM), Curtin University |
| specimen_id | CCDM_22PM422 |
| specimen_id_description | Centre for Crop and Disease Management (CCDM), Curtin University |
| state_or_region | WA |
| sub_species | tritici |
| taxon_id | 62690 |
| taxonomic_group | Fungi |
| ticket | BPAOPS-1848 |