NA, reference genome, illumina-shortread, NA
Dataset size is: 0.00 Bit
This dataset is currently under a short embargo period until August 20, 2026 to enable primary access by research partners.
If you would like access during this period please contact us here or contact the project lead directly (see details in the table below) for collaboration opportunities.
Data and Resources
Please see the initiative
Data Policy
for attribution information.
Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Resource Permissions | organization_member_after_embargo:date_of_transfer_to_archive:365:fungi-consortium-members |
| Access Control Date | 2026-08-20 |
| Access Control Mode | date |
| Sequence Data Type | illumina-shortread |
| altitude | NA |
| analysis_software | NovaSeq X Control Software v1.3.1.59007; Real Time Analysis v4.29.3; Dragen BCL Convert vt 07.031.732.4.3.6 |
| ancillary_notes | NA |
| associated_media | NA |
| base_url | https://downloads-qcif.bioplatforms.com/bpa/fungi_staging/illumina-shortread/BPAOPS-1873/20250820_FUN_AGRF_CAGRF25050478_2353MWLT3/ |
| bioplatforms_dataset_id | 102.100.100/467827 |
| bioplatforms_library_id | 102.100.100/467286 |
| bioplatforms_project | Australian Functional Fungi Initiative |
| bioplatforms_sample_id | 102.100.100/465234 |
| ccg_jira_ticket | BPAOPS-1873 |
| class | Sordariomycetes |
| collection_method | NA |
| collection_permit | NA |
| collector | Barbetti, M.J. |
| collector_sample_id | NA |
| common_name | NA |
| country | Australia |
| data_context | reference genome |
| data_type | Illumina-shortread |
| date_of_transfer | 2025-08-20 |
| date_of_transfer_to_archive | 2025-08-21 |
| decimal_latitude_public | NA |
| decimal_longitude_public | NA |
| depth | NA |
| env_broad_scale | NA |
| env_local_scale | NA |
| env_medium | NA |
| facility_project_code | CAGRF25050478 |
| facility_sample_id | 20227-32 |
| family | Nectriaceae |
| flow_cell_id | 2353MWLT3 |
| flowcell_id | 2353MWLT3 |
| flowcell_type | 10B-300 |
| folder_name | 20250820_FUN_AGRF_CAGRF25050478_2353MWLT3 |
| genus | Fusarium |
| habitat | NA |
| health_state | unknown |
| host_common_name | NA |
| host_family | NA |
| host_organ | NA |
| host_scientific_name | Trifolium subterraneum |
| host_status | NA |
| host_symptom | NA |
| identified_by | NA |
| indigenous_location | NA |
| insert_size_range | 600.0 |
| isolate | NA |
| library_construction_protocol | Illumina DNA Prep M |
| library_id | 467286 |
| library_index_seq_dual | UDP0032-F & UDP0032-R |
| library_location | AGRF Melbourne |
| library_ng_ul | 2.83 |
| library_oligo_sequence_dual | ACAGTGTATG-GAACATACGG |
| library_pcr_cycles | 5.0 |
| library_prep_date | 2025-08-07 |
| library_prepared_by | BX |
| library_source | DNA |
| library_type | illumina-shortread |
| life_stage | unknown |
| location_info_restricted | no |
| location_text | Mount Barker |
| material_conc_ng_ul | 50.0 |
| material_extracted_by | Nicolau Sbaraini |
| material_extraction_date | 2025-05-15 |
| material_extraction_method | phenol/chloroform |
| material_extraction_type | gDNA |
| metadata_revision_date | 2025-08-25 |
| metadata_revision_filename | FUN_MASTER_sample_metadata_FORDP_20250825_NOLATLON.xlsx |
| order | Hypocreales |
| phylum | Ascomycota |
| project_collaborators | Nico Sbaraini Oliveira |
| project_lead | Yit Heng Chooi |
| sample_collection_type | herbarium |
| sample_custodian | Martin Barbetti |
| sample_id | WAC7914 |
| sample_id_description | Western Australian Plant Pathology Reference Culture Collection |
| sample_quality | NA |
| sample_type | NA |
| scientific_name | Fusarium sp. |
| scientific_name_authorship | NA |
| scientific_name_note | NA |
| sequencing_kit_chemistry_version | XLEAP SBS |
| sequencing_model | X Plus |
| sequencing_platform | NovaSeq |
| source_population | NA |
| species | NA |
| specimen_custodian | Martin Barbetti |
| specimen_id | WAC7914 |
| specimen_id_description | Martin Barbetti |
| state_or_region | South Australia |
| sub_species | NA |
| taxon_id | NA |
| taxonomic_group | Fungi |
| temperature | NA |
| ticket | BPAOPS-1873 |
| tissue | NA |
| tissue_preservation | NA |
| tissue_preservation_temperature | NA |
| type_status | NA |
| wild_captive | NA |
| work_order | 21032 |