Tulasnella, reference genome, illumina-transcriptomics, Protocorm and fungus
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This dataset is currently under a short embargo period until August 25, 2026 to enable primary access by research partners.
If you would like access during this period please contact us here or contact the project lead directly (see details in the table below) for collaboration opportunities.
Data and Resources
Please see the initiative
Data Policy
for attribution information.
Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Resource Permissions | organization_member_after_embargo:date_of_transfer_to_archive:365:fungi-consortium-members |
| Access Control Date | 2026-08-25 |
| Access Control Mode | date |
| Sequence Data Type | illumina-shortread |
| altitude | NA |
| analysis_software | DRAGEN BCLConvert 4.3.16 |
| ancillary_notes | SF6 |
| bait_set_name | N/A |
| bait_set_reference | N/A |
| base_url | https://downloads-qcif.bioplatforms.com/bpa/fungi_staging/illumina-shortread/BPAOPS-1881/20250825-22F3JMLT1-WO21030/ |
| bioplatforms_dataset_id | 102.100.100/467826 |
| bioplatforms_library_id | 102.100.100/467250 |
| bioplatforms_project | Australian Functional Fungi Initiative |
| bioplatforms_sample_id | 102.100.100/465198 |
| ccg_jira_ticket | BPAOPS-1881 |
| cell_postion | N/A |
| class | Basidiomycota |
| collection_date | 2024-05-01 |
| collection_method | In vitro germination of seed |
| collector | Celeste Linde |
| common_name | Tulasnella |
| country | Australia |
| data_context | reference genome |
| data_type | Illumina-shortread |
| date_of_transfer | 2025-08-25 |
| date_of_transfer_to_archive | 2025-08-26 |
| depth | NA |
| dna_treatment | N/A |
| env_local_scale | NA |
| env_medium | NA |
| experimental_design | N/A |
| facility_project_code | NA |
| facility_sample_id | 467250_FUN_BRF_22F3JMLT1_GACTGAGTAG-GTTGATAGTG |
| family | Basidiomycota |
| fast5_compression | N/A |
| flow_cell_id | library |
| flowcell_id | 22F3JMLT1 |
| flowcell_type | NovaSeq X Series 1.5B |
| folder_name | 20250825_FUN_BRF_467826_22F3JMLT1 |
| genus | Tulasnella |
| habitat | NA |
| health_state | Healthy |
| host_common_name | Orchid |
| host_family | Orchidaceae |
| host_organ | Protocorm |
| host_scientific_name | Chiloglottis trapeziformis |
| host_status | In vitro |
| host_symptom | Asymptomatic |
| identified_by | Celeste Linde |
| indigenous_location | Ngunnawal and Ngambri |
| insert_size_range | 400.0 |
| isolate | T.prima-C. trapeziformis protocorms SF6 |
| library_comments | N/A |
| library_construction_protocol | NEB Directional cDNA Prep, Illumina DNA Prep - Tagmentation |
| library_id | 467250 |
| library_index_id | UDP0009 |
| library_index_id_dual | UDP0009 |
| library_index_seq_dual | GTTGATAGTG |
| library_index_sequence | GACTGAGTAG |
| library_layout | paired-end |
| library_location | BRF Freezer |
| library_ng_ul | 5.79 |
| library_oligo_sequence | CAAGCAGAAGACGGCATACGAGATgactgagtagGTGACTGGAGTTCAGACGTGTGCTCTTCCGATCT |
| library_oligo_sequence_dual | AATGATACGGCGACCACCGAGATCTACAgttgatagtgTCGTCGGCAGCGTCAGATGTGTATAAGAGACAG |
| library_pcr_cycles | 12.0 |
| library_pcr_reps | N/A |
| library_prepared_by | Lachlan Morrison |
| library_selection | N/A |
| library_source | Total RNA |
| library_strategy | Tagmentation |
| library_type | illumina-transcriptomics |
| life_stage | Protocorms |
| location_info_restricted | Yes |
| location_text | Black Mountain Botanic Garden |
| material_conc_ng_ul | 57.9 |
| material_extracted_by | Eric Perreira |
| material_extraction_date | 2024-11-01 |
| material_extraction_type | RNA |
| metadata_revision_date | 2025-08-25 |
| metadata_revision_filename | FUN_MASTER_sample_metadata_FORDP_20250825_NOLATLON.xlsx |
| model_base_caller | N/A |
| movie_length | N/A |
| n_libraries_pooled | 40.0 |
| order | Basidiomycota |
| phylum | Basidiomycota |
| project_collaborators | Benjamin Schwessinger (ANU), Rod Peakall (ANU), Darren Wong (ANU) |
| project_lead | Celeste Linde |
| sample_collection_type | Germinated Protocorms |
| sample_custodian | Celeste Linde |
| sample_id | T.prima-C. trapeziformis protocorms SF6 |
| sample_quality | Good |
| sample_type | plant and fungus tissue |
| scientific_name | Tulasnella prima + Chiloglottis trapeziformis |
| scientific_name_authorship | C.C. Linde $ T.W. May |
| sequencing_facility | BRF |
| sequencing_kit_chemistry_version | N/A |
| sequencing_model | NovaSeq X Series |
| sequencing_platform | Illumina |
| species | prima |
| specimen_id | T.prima-C. trapeziformis protocorms SF6 |
| state_or_region | Australian Capitol Territory |
| sub_species | NA |
| taxonomic_group | Fungi+Plant |
| temperature | NA |
| ticket | BPAOPS-1881 |
| tissue | Protocorm and fungus |
| tissue_preservation | Frozen |
| tissue_preservation_temperature | -80.0 |
| wild_captive | In vitro |
| work_order | 21030 |