NA, Reference genome, Illumina-transcriptomics, leaf
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This dataset is currently under a short embargo period until May 30, 2026 to enable primary access by research partners.
If you would like access during this period please contact us here or contact the project lead directly (see details in the table below) for collaboration opportunities.
Data and Resources
Please see the initiative
Data Policy
for attribution information.
Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Resource Permissions | organization_member_after_embargo:date_of_transfer_to_archive:365:fungi-consortium-members |
| Access Control Date | 2026-05-30 |
| Access Control Mode | date |
| Sequence Data Type | illumina-shortread |
| altitude | NA |
| analysis_software | Illumina DRAGEN BCLConvert 4.3.16 |
| ancillary_notes | NA |
| associated_media | NA |
| bait_set_name | N/A |
| bait_set_reference | N/A |
| base_url | https://downloads-qcif.bioplatforms.com/bpa/fungi_staging/illumina-shortread/BPAOPS-1788/20250530_FUN_BRF_467816_22KMT3LT3/ |
| bioplatforms_dataset_id | 102.100.100/467816 |
| bioplatforms_library_id | 102.100.100/467043 |
| bioplatforms_project | Australian Functional Fungi Initiative |
| bioplatforms_sample_id | 102.100.100/464996 |
| ccg_jira_ticket | BPAOPS-1788 |
| cell_postion | N/A |
| class | Exobasidiomycetes |
| collection_date | 2020-06-25 |
| collection_method | collected diseased plant material |
| collection_permit | unknown |
| collector | I. Zeil-Rolfe |
| collector_sample_id | NA |
| common_name | NA |
| country | Brazil |
| data_context | Reference genome |
| data_type | Illumina-shortread |
| date_of_transfer | 2025-05-30 |
| date_of_transfer_to_archive | 2025-05-30 |
| depth | NA |
| dna_treatment | N/A |
| env_broad_scale | terrestrial natural envrionment |
| env_local_scale | subtropical |
| env_medium | organic material |
| experimental_design | N/A |
| facility_project_code | NA |
| facility_sample_id | 467043_FUN_BRF_22KMT3LT3_GATCAAGGCA-CCTTGTTAAT |
| family | Brachybasidiaceae |
| fast5_compression | N/A |
| flow_cell_id | 22KMT3LT3 |
| flowcell_id | 22KMT3LT3 |
| flowcell_type | NovaSeq X Series 10B |
| folder_name | 20250530_FUN_BRF_467816_22KMT3LT3 |
| genus | Kordyana |
| habitat | NA |
| health_state | Diseased |
| host_common_name | Wandering trad |
| host_family | Commelinaceae |
| host_organ | leaf |
| host_scientific_name | Tradescantia fluminensis |
| host_status | Wild |
| host_symptom | leaf spot |
| identified_by | I. Zeil-Rolfe |
| indigenous_location | NA |
| insert_size_range | 381.0 |
| isolate | KBY2 |
| library_comments | N/A |
| library_construction_protocol | Illumina DNA Prep |
| library_id | 467043 |
| library_index_id | UDP0008 |
| library_index_id_dual | UDP0008 |
| library_index_seq_dual | CCTTGTTAAT |
| library_index_sequence | GATCAAGGCA |
| library_layout | Paired end |
| library_location | BRF Freezer |
| library_ng_ul | 7.15 |
| library_oligo_sequence | CAAGCAGAAGACGGCATACGAGATgatcaaggcaCTGTCTCTTATACACATCTCCGAGCCCACGAGAC |
| library_oligo_sequence_dual | AATGATACGGCGACCACCGAGATCTACACccttgttaatTCGTCGGCAGCGTCAGATGTGTATAAGAGACAG |
| library_pcr_cycles | 11.0 |
| library_pcr_reps | N/A |
| library_prepared_by | Lachlan Morrison |
| library_selection | N/A |
| library_source | Total RNA |
| library_strategy | Tagmentation |
| library_type | Illumina-transcriptomics |
| life_stage | mature plant |
| location_info_restricted | yes |
| location_text | Universidade Federal de Vicosa |
| material_conc_ng_ul | 48.0 |
| material_extracted_by | V. Mohankumar |
| material_extraction_date | 2024-10-01 |
| material_extraction_method | Sigma Aldrich mirPremier microRNA Isolation Kit |
| material_extraction_type | RNA |
| metadata_revision_date | 2025-08-25 |
| metadata_revision_filename | FUN_MASTER_sample_metadata_FORDP_20250825_NOLATLON.xlsx |
| model_base_caller | N/A |
| movie_length | N/A |
| n_libraries_pooled | 1.0 |
| order | Exobasidiales |
| phylum | Basidiomycota |
| project_collaborators | Cecile Gueidan, Gavin Hunter |
| project_lead | Beatrice Apirajkamol |
| sample_collection_type | living collection, herbarium |
| sample_custodian | CSIRO, Queensland Plant Pathology Herbarium |
| sample_id | BRIP 75726b_Kordyana brasiliensis_KBY2 |
| sample_id_description | Queensland Plant Pathology Herbarium |
| sample_quality | good |
| sample_type | pure fungal culture |
| scientific_name | Kordyana brasiliensis |
| scientific_name_authorship | D.M. Macedo, O.L. Pereira & R.W. Barreto (2015) |
| scientific_name_note | NA |
| sequencing_facility | BRF |
| sequencing_kit_chemistry_version | N/A |
| sequencing_model | NovaSeq X Series |
| sequencing_platform | Illumina |
| source_population | NA |
| species | brasiliensis |
| specimen_custodian | CSIRO, Queensland Plant Pathology Herbarium |
| specimen_id | BRIP 75726b |
| specimen_id_description | Queensland Plant Pathology Herbarium |
| state_or_region | Minas Gerais |
| sub_species | NA |
| taxon_id | 864824.0 |
| taxonomic_group | Fungi |
| temperature | NA |
| ticket | BPAOPS-1788 |
| tissue | leaf |
| tissue_preservation | NA |
| tissue_preservation_temperature | NA |
| type_status | no |
| wild_captive | wild |
| work_order | 21009 |