Favolaschia, Reference Genome, illumina-shortread, Sporebody
Dataset size is: 0.00 Bit
This dataset is currently under a short embargo period until July 17, 2026 to enable primary access by research partners.
If you would like access during this period please contact us here or contact the project lead directly (see details in the table below) for collaboration opportunities.
Data and Resources
-
466624_FUN_AGRF_233LJJLT3_GAGTAT... Metadata Only FASTQ
-
466624_FUN_AGRF_233LJJLT3_GAGTAT... Metadata Only FASTQ
-
466624_FUN_AGRF_233LJJLT3_GAGTAT... Metadata Only FASTQ
-
466624_FUN_AGRF_233LJJLT3_GAGTAT... Metadata Only FASTQ
-
466624_FUN_AGRF_233LJJLT3_GAGTAT... Metadata Only FASTQ
-
466624_FUN_AGRF_233LJJLT3_GAGTAT... Metadata Only FASTQ
Please see the initiative
Data Policy
for attribution information.
Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Resource Permissions | organization_member_after_embargo:date_of_transfer_to_archive:365:fungi-consortium-members |
| Access Control Date | 2026-07-17 |
| Access Control Mode | date |
| Sequence Data Type | illumina-shortread |
| altitude | 644.0 |
| analysis_software | NovaSeq X Control Software v1.3.1.59007; Real Time Analysis v4.6.7; Dragen BCL Convert vt 07.031.732.4.3.6 |
| associated_media | With herbarium specimen |
| base_url | https://downloads-qcif.bioplatforms.com/bpa/fungi_staging/illumina-shortread/BPAOPS-1845/20250717_FUN_CAGRF24080246_233LJJLT3/ |
| bioplatforms_dataset_id | 102.100.100/467807 |
| bioplatforms_library_id | 102.100.100/466624 |
| bioplatforms_project | Australian Functional Fungi Initiative |
| bioplatforms_sample_id | 102.100.100/464621 |
| ccg_jira_ticket | BPAOPS-1845 |
| class | Agaricomycetes |
| collection_date | 2016-06-06 |
| common_name | Favolaschia |
| country | Australia |
| data_context | Reference Genome |
| data_type | Illumina-shortread |
| date_of_transfer | 2025-07-17 |
| date_of_transfer_to_archive | 2025-07-23 |
| decimal_latitude_public | -41.2556 |
| decimal_longitude_public | 145.418 |
| env_local_scale | By roadside near Guildford education centre |
| env_medium | On grass |
| facility_project_code | CAGRF24080246 |
| facility_sample_id | 19600-59 |
| family | Mycenaceae |
| flow_cell_id | 233LJJLT3 |
| flowcell_id | 233LJJLT3 |
| flowcell_type | 10B-300 |
| folder_name | 20250717_FUN_CAGRF24080246_233LJJLT3 |
| genus | Favolaschia |
| indigenous_location | Whadjuk |
| insert_size_range | 354.0 |
| library_construction_protocol | IDT xGen Prism |
| library_id | 466624 |
| library_index_seq_dual | D_i7 & D_i5 |
| library_location | AGRF Melbourne |
| library_ng_ul | 21.0 |
| library_oligo_sequence_dual | GAGTATACGT-TCCTCCAGTG |
| library_prep_date | 2025-06-23 |
| library_prepared_by | BP |
| library_source | DNA |
| library_type | illumina-shortread |
| location_info_restricted | No |
| location_text | Guilsford |
| material_extracted_by | AGRF |
| metadata_revision_date | 2025-08-25 |
| metadata_revision_filename | FUN_MASTER_sample_metadata_FORDP_20250825_NOLATLON.xlsx |
| order | Agaricales |
| phylum | Basidiomycota |
| project_lead | Ema Corro |
| sample_collection_type | Herbarium |
| sample_custodian | Ema Corro Mycommunity Applied Mycology |
| sample_id | MEL Herbarium ID |
| sample_id_description | Specimen from MEL that Ema Corro has sample of |
| sample_quality | Good |
| sample_type | Tissue sample |
| scientific_name | Favolaschia |
| scientific_name_authorship | Pat 1892 |
| scientific_name_note | unknown species |
| sequencing_facility | AGRF |
| sequencing_kit_chemistry_version | XLEAP SBS |
| sequencing_model | X Plus |
| sequencing_platform | NovaSeq |
| specimen_custodian | State Herbarium of Victoria |
| specimen_id | MEL2397554 |
| specimen_id_description | MEL Herbarium ID |
| state_or_region | Tasmania |
| taxon_id | 139071.0 |
| taxonomic_group | Fungi |
| ticket | BPAOPS-1845 |
| tissue | Sporebody |
| tissue_preservation | Dried herbaria material - sporebodies on grass |
| tissue_preservation_temperature | 20.0 |
| wild_captive | Wild |
| work_order | 21018 |