Trametes sp, Reference Genome, illumina-shortread, Sporebody

Polyporaceae, Trametes sp. ACV 08, Fungi, Project Lead: Ema Corro

Dataset size is: 0.00 Bit

Log in or Register to access resource
 
 

 

Data and Resources

Please see the initiative Data Policy for attribution information.

Additional Info Show Blank Fields

Field Value
Resource Permissions organization_member_after_embargo:date_of_transfer_to_archive:365:fungi-consortium-members
Access Control Date 2026-07-17
Access Control Mode date
Sequence Data Type illumina-shortread
analysis_software NovaSeq X Control Software v1.3.1.59007; Real Time Analysis v4.6.7; Dragen BCL Convert vt 07.031.732.4.3.6
ancillary_notes https://www.inaturalist.org/observations/121555623
associated_media https://www.inaturalist.org/observations/121555623
base_url https://downloads-qcif.bioplatforms.com/bpa/fungi_staging/illumina-shortread/BPAOPS-1845/20250717_FUN_CAGRF24080246_233LJJLT3/
bioplatforms_dataset_id 102.100.100/467807
bioplatforms_library_id 102.100.100/466595
bioplatforms_project Australian Functional Fungi Initiative
bioplatforms_sample_id 102.100.100/464592
ccg_jira_ticket BPAOPS-1845
class Agaricomycetes
collection_date 2022-06-13
collection_method Herbarium voucher
collection_permit DEECA permit no 10010392
collector Alison Vandekolk
common_name Trametes sp
country Australia
data_context Reference Genome
data_type Illumina-shortread
date_of_transfer 2025-07-17
date_of_transfer_to_archive 2025-07-23
decimal_latitude_public -37.21468
decimal_longitude_public 145.87587
env_broad_scale Eucalypt / tea tree forest
env_local_scale Open Eucalypt forest, in a gully with tea tree, moss, seasonal creek.
env_medium fallen dead, eucalypt tree trunk.
facility_project_code CAGRF24080246
facility_sample_id 19600-38
family Polyporaceae
flow_cell_id 233LJJLT3
flowcell_id 233LJJLT3
flowcell_type 10B-300
folder_name 20250717_FUN_CAGRF24080246_233LJJLT3
genus Trametes sp.
health_state unknown
identified_by Alison Vandekolk
indigenous_location Taungurung
insert_size_range 483.0
library_construction_protocol IDT xGen Prism
library_id 466595
library_index_seq_dual D_i7 & D_i5
library_location AGRF Melbourne
library_ng_ul 34.3
library_oligo_sequence_dual AGATGGATGG-CGTTGACTAT
library_prep_date 2025-06-23
library_prepared_by BP
library_source DNA
library_type illumina-shortread
life_stage Mature organism
location_info_restricted No
location_text Taylor Bay
material_extracted_by AGRF
metadata_revision_date 2025-08-25
metadata_revision_filename FUN_MASTER_sample_metadata_FORDP_20250825_NOLATLON.xlsx
order Polyporales
phylum Basidiomycota
project_lead Ema Corro
sample_collection_type Herbarium
sample_custodian Ema Corro Mycommunity Applied Mycology
sample_id ACV 08
sample_id_description Mycommunity Applied Mycology
sample_quality Good
sample_type Tissue sample
scientific_name Trametes sp
scientific_name_authorship Fr. (1836)
scientific_name_note unknown species
sequencing_facility AGRF
sequencing_kit_chemistry_version XLEAP SBS
sequencing_model X Plus
sequencing_platform NovaSeq
specimen_custodian State Herbarium of Victoria
specimen_id ACV 08
specimen_id_description Mycommunity Applied Mycology individual herbarium no before sent to MEL
state_or_region Victoria
taxon_id 5324.0
taxonomic_group Fungi
ticket BPAOPS-1845
tissue Sporebody
tissue_preservation Silica beads
tissue_preservation_temperature 20.0
wild_captive Wild
work_order 21018