Picipes melanopus, Reference Genome, illumina-shortread, Sporebody
Dataset size is: 0.00 Bit
This dataset is currently under a short embargo period until July 17, 2026 to enable primary access by research partners.
If you would like access during this period please contact us here or contact the project lead directly (see details in the table below) for collaboration opportunities.
Data and Resources
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466589_FUN_AGRF_233LJJLT3_TGTCAA... Metadata Only FASTQ
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466589_FUN_AGRF_233LJJLT3_TGTCAA... Metadata Only FASTQ
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466589_FUN_AGRF_233LJJLT3_TGTCAA... Metadata Only FASTQ
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466589_FUN_AGRF_233LJJLT3_TGTCAA... Metadata Only FASTQ
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466589_FUN_AGRF_233LJJLT3_TGTCAA... Metadata Only FASTQ
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466589_FUN_AGRF_233LJJLT3_TGTCAA... Metadata Only FASTQ
Please see the initiative
Data Policy
for attribution information.
Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Resource Permissions | organization_member_after_embargo:date_of_transfer_to_archive:365:fungi-consortium-members |
| Access Control Date | 2026-07-17 |
| Access Control Mode | date |
| Sequence Data Type | illumina-shortread |
| analysis_software | NovaSeq X Control Software v1.3.1.59007; Real Time Analysis v4.6.7; Dragen BCL Convert vt 07.031.732.4.3.6 |
| ancillary_notes | https://www.inaturalist.org/observations/168039749 |
| associated_media | https://www.inaturalist.org/observations/168039749 |
| base_url | https://downloads-qcif.bioplatforms.com/bpa/fungi_staging/illumina-shortread/BPAOPS-1845/20250717_FUN_CAGRF24080246_233LJJLT3/ |
| bioplatforms_dataset_id | 102.100.100/467807 |
| bioplatforms_library_id | 102.100.100/466589 |
| bioplatforms_project | Australian Functional Fungi Initiative |
| bioplatforms_sample_id | 102.100.100/464586 |
| ccg_jira_ticket | BPAOPS-1845 |
| class | Agaricomycetes |
| collection_date | 2023-06-18 |
| collection_method | Herbarium voucher |
| collection_permit | DEECA permit no 10010386 |
| collector | A Vandekolk |
| common_name | Picipes melanopus |
| country | Australia |
| data_context | Reference Genome |
| data_type | Illumina-shortread |
| date_of_transfer | 2025-07-17 |
| date_of_transfer_to_archive | 2025-07-23 |
| decimal_latitude_public | -37.37608 |
| decimal_longitude_public | 144.61516 |
| env_broad_scale | Wet native forest |
| env_local_scale | Damp mostly native forest. |
| env_medium | on a live mature eucalyptus tree |
| facility_project_code | CAGRF24080246 |
| facility_sample_id | 19600-32 |
| family | Polyporaceae |
| flow_cell_id | 233LJJLT3 |
| flowcell_id | 233LJJLT3 |
| flowcell_type | 10B-300 |
| folder_name | 20250717_FUN_CAGRF24080246_233LJJLT3 |
| genus | Picipes |
| health_state | unknown |
| identified_by | A Vandekolk |
| indigenous_location | Dja Dja Wurrung, Taungurung and Wurundjeri Woi Wurrung |
| insert_size_range | 470.0 |
| library_construction_protocol | IDT xGen Prism |
| library_id | 466589 |
| library_index_seq_dual | D_i7 & D_i5 |
| library_location | AGRF Melbourne |
| library_ng_ul | 14.9 |
| library_oligo_sequence_dual | TGTCAAGCGT-TTCTGAGTCA |
| library_prep_date | 2025-06-23 |
| library_prepared_by | BP |
| library_source | DNA |
| library_type | illumina-shortread |
| life_stage | Mature organism |
| location_info_restricted | No |
| location_text | Sout Ward, Macedon |
| material_extracted_by | AGRF |
| metadata_revision_date | 2025-08-25 |
| metadata_revision_filename | FUN_MASTER_sample_metadata_FORDP_20250825_NOLATLON.xlsx |
| order | Polyporales |
| phylum | Basidiomycota |
| project_lead | Ema Corro |
| sample_collection_type | Herbarium |
| sample_custodian | Ema Corro Mycommunity Applied Mycology |
| sample_id | ACV 33 |
| sample_id_description | Mycommunity Applied Mycology |
| sample_quality | Good |
| sample_type | Tissue sample |
| scientific_name | Picipes melanopus |
| scientific_name_authorship | (Pers.) Zmitr. & Kovalenko (2016) |
| sequencing_facility | AGRF |
| sequencing_kit_chemistry_version | XLEAP SBS |
| sequencing_model | X Plus |
| sequencing_platform | NovaSeq |
| species | melanopus |
| specimen_custodian | State Herbarium of Victoria |
| specimen_id | ACV 33 |
| specimen_id_description | Mycommunity Applied Mycology individual herbarium no before sent to MEL |
| state_or_region | Victoria |
| taxon_id | 1871912.0 |
| taxonomic_group | Fungi |
| ticket | BPAOPS-1845 |
| tissue | Sporebody |
| tissue_preservation | Silica beads |
| tissue_preservation_temperature | 20.0 |
| wild_captive | Wild |
| work_order | 21018 |