Unclassified Teratosphaeriaceae, reference genome, Illumina-shortread, NA
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Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Resource Permissions | organization_member_after_embargo:date_of_transfer_to_archive:365:fungi-consortium-members |
| Access Control Date | 2025-10-28 |
| Access Control Mode | date |
| Sequence Data Type | illumina-shortread |
| altitude | 25.25 |
| analysis_software | BCLconvert |
| ancillary_notes | Funding: AAS-4406 |
| associated_media | NA |
| bait_set_name | N/A |
| bait_set_reference | N/A |
| base_url | https://downloads-qcif.bioplatforms.com/bpa/fungi_staging/illumina-shortread/BPAOPS-1710/20241026_FUN_BRF_467797_AAG2HLVM5/ |
| bioplatforms_dataset_id | 102.100.100/467797 |
| bioplatforms_library_id | 102.100.100/465905 |
| bioplatforms_project | Australian Functional Fungi Initiative |
| bioplatforms_sample_id | 102.100.100/463908 |
| ccg_jira_ticket | BPAOPS-1710 |
| cell_postion | N/A |
| class | Dothideomycetes |
| collection_date | 2019-02-16 |
| collection_method | Dry-sieving |
| collection_permit | ATEP 18-19-4406 |
| collector | Belinda Ferrari, Catherine King, Eden Zhang, Daniel Wilkins, Mark Raymond |
| collector_sample_id | AAD 174394 |
| common_name | Unclassified Teratosphaeriaceae |
| country | Antarctica |
| data_context | reference genome |
| data_type | Illumina-shortread |
| date_of_transfer | 2024-10-28 |
| date_of_transfer_to_archive | 2024-10-28 |
| decimal_latitude_public | -66.36774 |
| decimal_longitude_public | 110.58534 |
| depth | 0.03-0.1 |
| dna_treatment | N/A |
| env_broad_scale | polar biome [ENVO_01000339] |
| env_local_scale | polar desert biome [ENVO_01000186], cold desert [ENVO_01000382] |
| env_medium | soil [ENVO_00001998] |
| experimental_design | WGS |
| facility_project_code | NA |
| facility_sample_id | 1.0 |
| family | Teratosphaeriaceae |
| fast5_compression | N/A |
| flow_cell_id | AAG2HLVM5 |
| flowcell_id | AAG2HLVM5 |
| flowcell_type | NextSeq 2000 P1 |
| folder_name | 20241026_FUN_BRF_467797_AAG2HLVM5 |
| habitat | polar desert biome |
| health_state | NA |
| host_common_name | NA |
| host_family | NA |
| host_organ | NA |
| host_scientific_name | NA |
| host_status | NA |
| host_symptom | NA |
| identified_by | Priyanka R. Majumdar | Nicole Benaud | Xabier Vázquez-Campos | Belinda Ferrari | Brett Summerell |
| indigenous_location | NA |
| insert_size_range | 150 bp PE |
| isolate | KMR92 |
| library_comments | N/A |
| library_construction_protocol | Illumina DNA Prep, Tagmentation |
| library_id | 465905 |
| library_index_id | UDP0049 |
| library_index_id_dual | UDP0049 |
| library_index_seq_dual | CTGGTACACG |
| library_index_sequence | AGTGTTGCAC |
| library_layout | paired end |
| library_location | BRF Freezer |
| library_ng_ul | 100.0 |
| library_oligo_sequence | CAAGCAGAAGACGGCATACGAGATagtgttgcacGTCTCGTGGGCTCGGAGATGTGTATAAGAGACAG |
| library_oligo_sequence_dual | AATGATACGGCGACCACCGAGATCTACACctggtacacgTCGTCGGCAGCGTCAGATGTGTATAAGAGACAG |
| library_pcr_cycles | 5.0 |
| library_pcr_reps | N/A |
| library_prepared_by | Lachlan Morrison |
| library_selection | N/A |
| library_source | gDNA |
| library_strategy | WGS Tagmentation |
| library_type | Illumina-shortread |
| life_stage | NA |
| location_info_restricted | no |
| location_text | Robinson Ridge |
| material_conc_ng_ul | unknown |
| material_extracted_by | Priyanka R. Majumdar |
| material_extraction_method | CTAB-based |
| material_extraction_type | DNA |
| metadata_revision_date | 2025-08-25 |
| metadata_revision_filename | FUN_MASTER_sample_metadata_FORDP_20250825_NOLATLON.xlsx |
| model_base_caller | N/A |
| movie_length | N/A |
| n_libraries_pooled | 3.0 |
| order | Mycosphaerellales |
| phylum | Ascomycota |
| project_collaborators | N/A |
| project_lead | Belinda Ferrari |
| sample_collection_type | Living collection |
| sample_custodian | Belinda Ferrari (UNSW) |
| sample_id | KMR92_DNA_LR |
| sample_id_description | specimen_id+extracted_material(+condition+replicate) |
| sample_quality | Excellent |
| sample_type | Whole organism |
| scientific_name | Unclassified Teratosphaeriaceae |
| scientific_name_authorship | Crous & U. Braun |
| scientific_name_note | new sp. - undescribed |
| sequencing_facility | BRF |
| sequencing_kit_chemistry_version | XLEAP SBS |
| sequencing_model | NextSeq 2000 |
| sequencing_platform | Illumina |
| source_population | NA |
| specimen_custodian | Belinda Ferrari (UNSW) |
| specimen_id | KMR92 |
| specimen_id_description | Ferrari lab fungal Internal identifier |
| state_or_region | Eastern ANorthern Territoryarctica |
| taxon_id | 702028.0 |
| taxonomic_group | Fungi |
| temperature | unknown |
| ticket | BPAOPS-1710 |
| tissue | NA |
| tissue_preservation | NA |
| tissue_preservation_temperature | NA |
| type_status | NA |
| wild_captive | Other (culture) |
| work_order | 21017 |